Programming with R and PERL

R Programming Resources
Site Name	Description	Clicks
The Comprehensive R Archive Network	To Download R for the specific operating system.	2685
R and Data Mining	This website is dedictaed to the R programming, where lots of example of R code-usage have been shown.	3891
R Project Home Page	This is the home page for R package hosted by the Institute for Statistics and Mathematics of the WU Wien.	2712
Bioconductor login page	This is the login page for the bioconductor mailing-members. "Bioconductor is an open source and open development software project for the analysis and comprehension of genomic data".	2787
R-Bioconductor Home	"Bioconductor provides tools for the analysis and comprehension of high-throughput genomic data. Bioconductor uses the R statistical programming language, and is open source and open development".	4515
R-codes by Koders	This website provides codes on various topics of R and other software languages.	2703
R-Coding Example	Another site that elucidates the R-codes for various applications, along with syntactical examples.	3347
Quick-R	R program codes for various complex statistical applications are available here.	6040
R Function Index	List of R-hyperlinked function names. Each of the functions have been briefly discussed for the usage along with description and example.	2505
R Graphical Manual	Describes the graphical functions, along with syntax and example.	2651
R Library Advanced Functions	Provides description of various R functions.	2914
R Tutorial	"A Quick, Painless Tutorial and Reference on the R Statistical Package".	3417
R Tutorial	An online tutorial to learn R programming.	4832
R Discussion Forum	An online discussion forum for R programming.	4030
R bloggers	â€œR-Bloggers.com is a central hub (e.g. a blog aggregator) of content collected from bloggers who write about R (in English). The site will help R bloggers and users to connect and follow the â€œR blogosphereâ€.	3541
R-help	This site is practically very helpful for a number of uses, namely, â€œannouncements about the development of R and the availability of new code, questions and answers about problems and solutions using R, enhancements and patches to the source code and documentation of R, comparison and compatibility with S and S-plus, and for the posting of nice examples and benchmarksâ€.	4034
R-LIMMA package	The linear model for micro-array data analysis (LIMMA) package is available here. This page is hosted by Walter and Eliza Hall Institute Bioinformatics Division. "This site contains software tools and other resources maintained by the Division".	2698

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PERL resources
Site Name	Description	Clicks
Comprehensive Perl Archive Network	A hub of Perl modules, Perl ports and source.	2695
Perl-Meme	"This site is devoted to spreading the Perl meme and to providing an easy place to find complete, working examples of good Perl code".	2593
Perl-Learning site	This site contains all relevant information about Perl programming language, viz. books, basic aspect, module etc.	2860
List of Perl Functions	Categorizes Perl functions either alphabatically or category wise.	3455
PERL Tutorial	It is very good start-site for learning PERL very quickly.	3336
Perl Guide and Resources	This website includes Perl Guide and Resources	4172

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Linux
Site Name	Description	Clicks
Linux Commands	Represents some useful commands used in Linux.	6997
Linux4Chemistry	Linux4Chemistry provides information about computational chemistry software for the Linux operating system.	3447
Software Collection	It is a collection of free crossplatform vis-à-vis Linux software	2311
The Linux Documentation Project	It’s a site that harbors relevant articles, Guidelines and Frequently Asked Questions on Linux	2404
Landscape Initiative- Ubuntu	It’s a paid enterprise quality support offered by Canonical for Ubuntu users	2288
Ubuntu Help	"This site is where you can find the official documentation developed and maintained by the Ubuntu Documentation Project"	3503
Ubuntu Support	It offers free as well as paid support to Ubuntu Linux users	2264
Debian GNU/Linux	Homepage of Debian. Users can go to related paths to open several support pages viz. www.debian.org/intro/free	2275
Ubuntu Releases	To check and download new Ubuntu releases. Approximately, every six months Ubuntu gets new releases.	2365
OpenStack project	It’s the Open stack project supported by Cannonical	2325
Amazon CloudInit	The "cloud-init is the Ubuntu package that handles early initialization of a cloud instance. It is installed in the Ubuntu Cloud Images and also in the official Ubuntu images available on EC2"	4385
Ubuntu Mailer Site	"This list is for Ubuntu user technical support. This is not a place for general discussions."	5044
Ubuntu forum	A discussion forum on Ubuntu and a social network	3049
Ubuntu Screen Casts	It is used to view recorded desktop sessions	2233

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Quotes

“Biostatistics is a radar for biomedicine “that” allows biologists to navigate in an immense ocean of information with only a small amount of light, saving them from inappropriate experiments and helping them to design consistent ones”

(EurekAlert!, the online, global news service operated by AAAS, the science society).

“Bioinformatics is like an amoeba; it comes in various shapes and sizes.”

(Nancy Lorenzi)

Bioconductor, Codes, R-Programming, Programming in R, R coding, PERL Coding, Coding in PERL, Bioinformatics using R, R manual, R Graphics, R Help, PERL help, LIMMA, WGCNA, Linux, Linux help, R Bloggers, Data mining, Heatmap, Pfam, PRINTS, Blocks, PIR, PROSITE, ProDom, InterPro, EMBL-EBI, EMBL, parenteral, nih.gov, diabetes, mrsa, mononucleosis, DDBJ, PDB, Multiple EM for Motif Elicitation (MEME)

R & PERL

Programming with R and PERL

Quotes